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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs71618219 chr5:45950700 T/C LOC647121 chr1:121260910-121313686:+ 0.37 7.78 4.62E-14 Box Plot
THCA rs71629182 chr5:43643104 G/A UQCRC1 chr3:48636435-48648409:- -0.34 -5.97 4.51E-9 Box Plot
THCA rs71629184 chr5:43650289 C/T UQCRC1 chr3:48636435-48648409:- -0.34 -5.97 4.51E-9 Box Plot
THCA rs71629187 chr5:43679310 T/G UQCRC1 chr3:48636435-48648409:- -0.34 -5.97 4.51E-9 Box Plot
THCA rs71629189 chr5:43686133 T/C UQCRC1 chr3:48636435-48648409:- -0.34 -6.06 2.76E-9 Box Plot
THCA rs71629193 chr5:43694961 G/A UQCRC1 chr3:48636435-48648409:- -0.34 -6.06 2.76E-9 Box Plot
THCA rs71631104 chr5:43758836 C/A UQCRC1 chr3:48636435-48648409:- -0.35 -6.08 2.43E-9 Box Plot
THCA rs7165273 chr15:31037843 G/C CHRNA7 chr15:32215641-32465219:+ 0.32 7.39 6.73E-13 Box Plot
THCA rs7166182 chr15:41514699 A/G C8orf59 chr8:86126311-86132650:- 0.23 5.98 4.33E-9 Box Plot
THCA rs7166258 chr15:30950529 C/T CHRNA7 chr15:32215641-32465219:+ -0.44 -9.38 2.57E-19 Box Plot
THCA rs7166432 chr15:30950595 T/G CHRNA7 chr15:32215641-32465219:+ 0.28 6.57 1.29E-10 Box Plot
THCA rs7169096 chr15:31035107 G/A CHRNA7 chr15:32215641-32465219:+ 0.3 7.12 3.93E-12 Box Plot
THCA rs716960 chr5:43705791 G/A UQCRC1 chr3:48636435-48648409:- -0.35 -6.18 1.37E-9 Box Plot
THCA rs71731458 chr22:24050291 CGT/C IGLL3 chr22:25713888-25716191:+ 0.6 9.02 4.72E-18 Box Plot
THCA rs71749928 chr11:49301541 GAT/G FOLH1B chr11:89372395-89431886:+ 0.46 7.48 3.53E-13 Box Plot